Publications

Influence of fermented milk products, prebiotics and probiotics on microbiota composition and health. Ceapa C, Wopereis H, Rezaïki L, Kleerebezem M, Knol J, Oozeer R. Best Pract Res Clin Gastroenterol. 2013 Feb;27(1):139-55. [Pubmed]

Patented biotechnological applications of serpin: an update. Gaci N, Dobrijevic D, Boudebbouze S, Moumen B, Maguin E, Rhimi M. Recent Pat DNA Gene Seq. 2013 Aug;7(2):137-43. [Pubmed]

 

High-throughput system for the presentation of secreted and surface-exposed proteins from Gram-positive bacteria in functional metagenomics studies. Dobrijevic D, Di Liberto G, Tanaka K, de Wouters T, Dervyn R, Boudebbouze S, Binesse J, Blottière HM, Jamet A, Maguin E, van de Guchte M. PLoS One. 2013 Jun [Pubmed]

 

Microbes for Health 2 Symposium: meeting report. Archambaud C, de Wouters T, Dobrijevic D, Grompone G, Pédron T. Res Microbiol. 2012 Feb;163(2):151-5. Epub 2012 Feb 3. [Pubmed]

Butyrate produced by commensal bacteria potentiates phorbol esters induced AP-1 response in human intestinal epithelial cells. Nepelska M, Cultrone A, Béguet-Crespel F, Le Roux K, Doré J, Arulampalam V, Blottière HM. PLoS One. 2012;7(12):e52869. Epub 2012 Dec 27. [Pubmed]

Identification of NF-kB modulation capabilities within human intestinal commensal bacteria. Lakhdari O, Tap J, Beguet F, Le Roux K, de Wouters T, Cultrone A, Nepelska M, Lefevre F, Doré J, Blottière HM. J Biomed Biotech, 2011. [Pubmed]

Faecalibacterium prausnitzii and human intestinal health. Miquel S, Martín R, Rossi O, Bermúdez-Humarán L, Chatel J, Sokol H, Thomas M, Wells J, Langella P. Curr Opin Microbiol. 2013 Jun;16(3):255-61. Epub 2013 Jul 3 [Pubmed]

Host-Recognition of Pathogens and Commensals in the Mammalian Intestine. Rossi O, van Baarlen P, Wells JM. Curr Top Microbiol Immunol. 2011 Dec 17 [Pubmed]

Epithelial crosstalk at the microbiota-mucosal interface. J. M. Wells, O. Rossi, M. Meijerink, and P. van Baarlen. Proc. Natl. Acad. Sci. USA 2010 0: 1000092107v1-201000092 [Pubmed]

Immunotherapy of allergic diseases using probiotics or recombinant probiotics. de Azevedo MS, Innocentin S, Dorella FA, Rocha CS, Mariat D, Pontes DS, Miyoshi A, Azevedo V, Langella P, Chatel JM. J Appl Microbiol. 2013 Aug;115(2):319-33. Epub 2013 Mar 13. [Pubmed]

In vitro and in vivo characterization of DNA delivery using recombinant Lactococcus lactis expressing a mutated form of L. monocytogenes Internalin A. de Azevedo M, Karczewski J, Lefèvre F, Azevedo V, Miyoshi A, Wells JM, Langella P, Chatel JM BMC Microbiol. 2012 Dec 19;12:299. BMC Microbiol. 2012 Dec 19;12:299.[Pumed]

 

Cytoplasmic and extracellular expression of pharmaceutical-grade mycobacterial 65-kDa heat shock protein in Lactococcus lactis. de Azevedo MS, Rocha CS, Electo N, Pontes DS, Molfetta JB, Gonçalves ED, Azevedo V, Silva CL, Miyoshi A. Genet Mol Res. 2012 Apr 27;11(2):1146-57 [Pubmed]

 

Lactococcus lactis as a live vector: Heterologous protein production and DNA delivery systems. Daniela Pontes, Marcela Azevedo, Jean Marc Chatel, Philippe Langella, Vasco Azevedo, Anderson Miyoshi.  2011. Protein Expression Purification. 79(2):165-75 [Pubmed]

Epithelial-microbial cross-talk in polymeric Ig receptor deficient mice. Reikvam DH, Derrien M, Islam R, Erofeev A, Grcic V, Sandvik A, , Gaustad P, Meza-Zepeda LA, Jahnsen FL, Smidt H, Johansen FE. Eur J Immunol. 2012 Nov; 42 (11) :2959- 70 [Pubmed]

 

ANGPTL4 expression induced by butyrate and rosiglitazone in human intestinal epithelial cells utilizes independent pathways. Korecka A, de Wouters T, Cultrone A, Lapaque N, Pettersson S, Doré J, Blottière HM, Arulampalam V. Am J Physiol Gastrointest Liver Physiol. 2013 Jun 1;304(11):G1025-37. Epub 2013 Mar 21. [Pubmed]

 

The gut microbiome: scourge, sentinel or spectator? Korecka A, Arulampalam V. J Oral Microbiol. 2012;4. Epub 2012 Feb 21. [Pubmed]

A novel method for the culture and polarized stimulation of human intestinal mucosa explants). Tsilingiri K, Sonzogni A, Caprioli F, Rescigno M. J Vis Exp. 2013 May 1;(75). [Pubmed]

 

Postbiotics: what else? Tsilingiri K, Rescigno M. Benef Microbes. 2013 Mar 1;4(1):101-7. [Pubmed]

 

Should probiotics be tested on ex vivo organ culture models? Tsilingiri K, Rescigno M. Gut Microbes. 2012 Sep 1;3(5). [Pubmed]

 

Probiotic and postbiotic activity in health and disease: comparison on a novel polarised ex-vivo organ culture model. Tsilingiri K, Barbosa T, Penna G, Caprioli F, Sonzogni A, Viale G, Rescigno M. Gut. 2012 Jul;61(7):1007-15. Epub 2012 Feb 1. [Pubmed]

 

Gadd45α activity is the principal effector of Shigella mitochondria-dependent epithelial cell death in vitro and ex vivo. Lembo-Fazio L, Nigro G, Noël G, Rossi G, Chiara F, Tsilingiri K, Rescigno M, Rasola A, Bernardini ML. Cell Death Dis. 2011 Feb 24;2:e122. [Pubmed]

The function of our microbiota: who is out there and what do they do? Front Cell Infect Microbiol. 2012;2:104. Epub 2012 Aug 9. Ottman N, Smidt H, de Vos WM, Belzer C. [Pubmed]

Protective effect of Clostridium tyrobutyricum in acute dextran sodium sulphate-induced colitis: differential regulation of tumour necrosis factor-α and interleukin-18 in BALB/c and severe combined immunodeficiency mice. Hudcovic T, Kolinska J, Klepetar J, Stepankova R, Rezanka T, Srutkova D, Schwarzer M, Erban V, Du Z, Wells JM, Hrncir T, Tlaskalova-Hogenova H, Kozakova H. Clin Exp Immunol. 2012 Feb;167(2):356-65.[Pubmed]

A novel type of peptidoglycan-binding domain highly specific for amidated D-Asp cross-bridge, identified in Lactobacillus casei bacteriophage endolysins. Regulski K, Courtin P, Kulakauskas S, Chapot-Chartier MP. J Biol Chem. 2013 Jul 12;288(28):20416-26. [Pubmed]

Analysis of the Peptidoglycan Hydrolase Complement of Lactobacillus casei and Characterization of the Major γ-D-Glutamyl-L-Lysyl-Endopeptidase. Regulski K, Courtin P, Meyrand M, Claes IJJ, Lebeer S, et al. (2012) PLoS ONE 7(2): e32301.  Epub 2012 Feb 27 [Pubmed]

Genetic and Biochemical Characterization of the Cell Wall Hydrolase Activity of the Major Secreted Protein of Lactobacillus rhamnosus GG. Claes IJJ, Schoofs G, Regulski K, Courtin P, Chapot-Chartier M-P, et al. (2012) PLoS ONE 7(2): e31588. doi:10.1371/journal.pone.0031588 [Pubmed]

Role of microbiota in postnatal maturation of intestinal T-cell responses. Gaboriau-Routhiau V, Lécuyer E, Cerf-Bensussan N. Curr Opin Gastroenterol. 2011 Oct;27(6):502-8. Review. PMID: 21946030 [Pubmed]

The key role of segmented filamentous bacteria in the coordinated maturation of gut helper T cell responses. Gaboriau-Routhiau, V., S. Rakotobe, E. Lecuyer, I. Mulder, A. Lan, C. Bridonneau, V. Rochet, A. Pisi, M. De Paepe, G. Brandi, G. Eberl, J. Snel, D. Kelly, and N. Cerf-Bensoussan. 2009. Immunity 31:677-689 [Pubmed]

Infant gut microbiota is protective against cow's milk allergy in mice despite immature ileal T-cell response. Rodriguez B, Prioult G, Hacini-Rachinel F, Moine D, Bruttin A, Ngom-Bru C, Labellie C, Nicolis I, Berger B, Mercenier A. FEMS Microbiol Ecol. 2012 Jan;79(1):192-202. [Pubmed]

Germ-free status and altered caecal subdominant microbiota are associated with a high susceptibility to cow's milk allergy in mice. Rodriguez B, Prioult G, Bibiloni R, Nicolis I, Mercenier A, Butel MJ, Waligora-Dupriet AJ. FEMS Microbiol Ecol. 2011 Apr;76(1):133-44. Epub 2011 Jan 19. [Pubmed]

Characterization of immunostimulatory CpG-rich sequences from different Bifidobacterium species. Ménard O, Gafa V, Kapel N, Rodriguez B, Butel MJ, Waligora-Dupriet AJ. Appl Environ Microbiol. 2010 May;76(9):2846-55. Epub 2010 Mar 5. [Pubmed] 

 

Dietary intervention impact on gut microbial gene richness. Cotillard A, Kennedy SP, Kong LC, Prifti E, Pons N, Le Chatelier E, Almeida M, Quinquis B, Levenez F, Galleron N, Gougis S, Rizkalla S, Batto JM, Renault P; ANR MicroObes consortium, Doré J, Zucker JD, Clément K, Ehrlich SD, Blottière H, Leclerc M, Juste C, de Wouters T, Lepage P, Fouqueray C, Basdevant A, Henegar C, Godard C, Fondacci M, Rohia A, Hajduch F, Weissenbach J, Pelletier E, Le Paslier D, Gauchi JP, Gibrat JF, Loux V, Carré W, Maguin E, van de Guchte M, Jamet A, Boumezbeur F, Layec S. Nature. 2013 Aug 29;500(7464):585-8. [Pubmed]

 

High-throughput system for the presentation of secreted and surface-exposed proteins from Gram-positive bacteria in functional metagenomics studies. Dobrijevic D, Di Liberto G, Tanaka K, de Wouters T, Dervyn R, Boudebbouze S, Binesse J, Blottière HM, Jamet A, Maguin E, van de Guchte M. PLoS One. 2013 Jun 14;8(6):e65956 [Pubmed]

 

ANGPTL4 expression induced by butyrate and rosiglitazone in human intestinal epithelial cells utilizes independent pathways. Korecka A, de Wouters T, Cultrone A, Lapaque N, Pettersson S, Doré J, Blottière HM, Arulampalam V. Am J Physiol Gastrointest Liver Physiol. 2013 Jun 1;304(11):G1025-37. Epub 2013 Mar 21. [Pubmed]

 

The NF-κB binding site located in the proximal region of the TSLP promoter is critical for TSLP modulation in human intestinal epithelial cells. Cultrone A, de Wouters T, Lakhdari O, Kelly D, Mulder I, Logan E, Lapaque N, Doré J, Blottière HM. Eur J Immunol. 2013 Apr;43(4):1053-62.  Epub 2013 Feb 11. [Pubmed]

 

 

Does our food (environment) change our gut microbiome ('in-vironment'): a potential role for inflammatory bowel disease? de Wouters T, Doré J, Lepage P. Dig Dis. 2012;30 Suppl 3:33-9. Epub 2013 Jan 3. [Pubmed]

 

Microbes for Health 2 Symposium: meeting report. Archambaud C, de Wouters T, Dobrijevic D, Grompone G, Pédron T. Res Microbiol. 2012 Feb;163(2):151-5. Epub 2012 Feb 3. [Pubmed]

 

Identification of NF-kB modulation capabilities within human intestinal commensal bacteria. Lakhdari O, Tap J, Beguet F, Le Roux K, de Wouters T, Cultrone A, Nepelska M, Lefevre F, Doré J, Blottière HM. J Biomed Biotech, 2011. [Pubmed]